STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MDY9_ORYBRUncharacterized protein. (573 aa)    
Predicted Functional Partners:
J3KZT1_ORYBR
Uncharacterized protein.
      
 0.531
J3L6I8_ORYBR
Uncharacterized protein.
  
     0.520
J3M3E4_ORYBR
Uncharacterized protein.
  
     0.517
J3LKT9_ORYBR
Uncharacterized protein.
  
     0.513
J3LU71_ORYBR
DUF4378 domain-containing protein.
  
     0.510
J3LTK0_ORYBR
GTD-binding domain-containing protein.
  
     0.507
J3KXU4_ORYBR
Uncharacterized protein.
  
     0.504
J3L4Y7_ORYBR
Uncharacterized protein.
  
     0.503
J3LMC3_ORYBR
Uncharacterized protein.
  
     0.503
J3LW69_ORYBR
Uncharacterized protein.
  
     0.499
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.