STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MGH8_ORYBRDUF295 domain-containing protein. (319 aa)    
Predicted Functional Partners:
J3LI42_ORYBR
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.709
J3MBN5_ORYBR
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.709
J3N133_ORYBR
DUF295 domain-containing protein.
  
     0.519
J3MV90_ORYBR
LMWPc domain-containing protein.
   
 
 0.516
J3L8J4_ORYBR
DUF4220 domain-containing protein.
  
     0.508
J3M6V0_ORYBR
DUF4220 domain-containing protein.
  
     0.475
J3MR27_ORYBR
DUF4220 domain-containing protein.
  
     0.465
J3LF07_ORYBR
F-box domain-containing protein.
  
     0.463
J3LVY8_ORYBR
DUF4220 domain-containing protein.
  
     0.463
J3MV42_ORYBR
Uncharacterized protein.
  
     0.461
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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