Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3L8J4_ORYBR | J3LF07_ORYBR | J3L8J4 | J3LF07 | DUF4220 domain-containing protein. | F-box domain-containing protein. | 0.423 |
J3L8J4_ORYBR | J3MGH8_ORYBR | J3L8J4 | J3MGH8 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.508 |
J3L8J4_ORYBR | J3MV42_ORYBR | J3L8J4 | J3MV42 | DUF4220 domain-containing protein. | Uncharacterized protein. | 0.448 |
J3L8J4_ORYBR | J3N133_ORYBR | J3L8J4 | J3N133 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.503 |
J3LF07_ORYBR | J3L8J4_ORYBR | J3LF07 | J3L8J4 | F-box domain-containing protein. | DUF4220 domain-containing protein. | 0.423 |
J3LF07_ORYBR | J3MGH8_ORYBR | J3LF07 | J3MGH8 | F-box domain-containing protein. | DUF295 domain-containing protein. | 0.463 |
J3LF07_ORYBR | J3N133_ORYBR | J3LF07 | J3N133 | F-box domain-containing protein. | DUF295 domain-containing protein. | 0.527 |
J3LI42_ORYBR | J3MBN5_ORYBR | J3LI42 | J3MBN5 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.900 |
J3LI42_ORYBR | J3MGH8_ORYBR | J3LI42 | J3MGH8 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | DUF295 domain-containing protein. | 0.709 |
J3LVY8_ORYBR | J3MGH8_ORYBR | J3LVY8 | J3MGH8 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.463 |
J3LVY8_ORYBR | J3MV42_ORYBR | J3LVY8 | J3MV42 | DUF4220 domain-containing protein. | Uncharacterized protein. | 0.407 |
J3LVY8_ORYBR | J3N133_ORYBR | J3LVY8 | J3N133 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.428 |
J3M6V0_ORYBR | J3MGH8_ORYBR | J3M6V0 | J3MGH8 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.475 |
J3M6V0_ORYBR | J3MV42_ORYBR | J3M6V0 | J3MV42 | DUF4220 domain-containing protein. | Uncharacterized protein. | 0.444 |
J3M6V0_ORYBR | J3N133_ORYBR | J3M6V0 | J3N133 | DUF4220 domain-containing protein. | DUF295 domain-containing protein. | 0.457 |
J3MBN5_ORYBR | J3LI42_ORYBR | J3MBN5 | J3LI42 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.900 |
J3MBN5_ORYBR | J3MGH8_ORYBR | J3MBN5 | J3MGH8 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | DUF295 domain-containing protein. | 0.709 |
J3MGH8_ORYBR | J3L8J4_ORYBR | J3MGH8 | J3L8J4 | DUF295 domain-containing protein. | DUF4220 domain-containing protein. | 0.508 |
J3MGH8_ORYBR | J3LF07_ORYBR | J3MGH8 | J3LF07 | DUF295 domain-containing protein. | F-box domain-containing protein. | 0.463 |
J3MGH8_ORYBR | J3LI42_ORYBR | J3MGH8 | J3LI42 | DUF295 domain-containing protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.709 |
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