STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MHW8_ORYBRClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (233 aa)    
Predicted Functional Partners:
J3L5N9_ORYBR
Uncharacterized protein.
  
     0.522
J3MNY2_ORYBR
Uncharacterized protein.
  
     0.521
J3M0E7_ORYBR
Uncharacterized protein.
  
     0.520
J3MV68_ORYBR
Uncharacterized protein.
  
     0.519
J3LA48_ORYBR
Uncharacterized protein.
  
     0.518
J3LGU4_ORYBR
Uncharacterized protein.
  
     0.514
J3MDA7_ORYBR
Uncharacterized protein.
  
     0.514
J3MPD7_ORYBR
Uncharacterized protein.
  
     0.513
J3L5D4_ORYBR
LOB domain-containing protein.
  
     0.512
J3LGN3_ORYBR
Uncharacterized protein.
  
     0.512
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.