STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3ML74_ORYBRSH3 domain-containing protein. (348 aa)    
Predicted Functional Partners:
J3M9L0_ORYBR
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.548
J3MMA5_ORYBR
FYVE-type domain-containing protein.
    
 
 0.466
J3L8F0_ORYBR
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.425
J3KW59_ORYBR
Uncharacterized protein.
  
 
  0.413
J3L153_ORYBR
Uncharacterized protein.
  
 
  0.408
J3L157_ORYBR
Uncharacterized protein.
  
 
  0.406
J3N3A2_ORYBR
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
 
 0.404
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.