Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3LID5_ORYBR | J3MLA9_ORYBR | J3LID5 | J3MLA9 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | Uncharacterized protein. | 0.522 |
J3LID5_ORYBR | J3MSK4_ORYBR | J3LID5 | J3MSK4 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.997 |
J3LID5_ORYBR | J3N0U0_ORYBR | J3LID5 | J3N0U0 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | F-box domain-containing protein. | 0.991 |
J3LID5_ORYBR | J3N578_ORYBR | J3LID5 | J3N578 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | Uncharacterized protein. | 0.653 |
J3LID5_ORYBR | J3N919_ORYBR | J3LID5 | J3N919 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. | 0.999 |
J3LZ12_ORYBR | J3MG58_ORYBR | J3LZ12 | J3MG58 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.986 |
J3LZ12_ORYBR | J3MLA9_ORYBR | J3LZ12 | J3MLA9 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.565 |
J3LZ12_ORYBR | J3MM22_ORYBR | J3LZ12 | J3MM22 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.989 |
J3LZ12_ORYBR | J3MU34_ORYBR | J3LZ12 | J3MU34 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.977 |
J3MG58_ORYBR | J3LZ12_ORYBR | J3MG58 | J3LZ12 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.986 |
J3MG58_ORYBR | J3MLA9_ORYBR | J3MG58 | J3MLA9 | Uncharacterized protein. | Uncharacterized protein. | 0.659 |
J3MG58_ORYBR | J3MM22_ORYBR | J3MG58 | J3MM22 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.992 |
J3MG58_ORYBR | J3MU34_ORYBR | J3MG58 | J3MU34 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
J3MG58_ORYBR | J3NCK1_ORYBR | J3MG58 | J3NCK1 | Uncharacterized protein. | Elp3 domain-containing protein. | 0.977 |
J3MLA9_ORYBR | J3LID5_ORYBR | J3MLA9 | J3LID5 | Uncharacterized protein. | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.522 |
J3MLA9_ORYBR | J3LZ12_ORYBR | J3MLA9 | J3LZ12 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.565 |
J3MLA9_ORYBR | J3MG58_ORYBR | J3MLA9 | J3MG58 | Uncharacterized protein. | Uncharacterized protein. | 0.659 |
J3MLA9_ORYBR | J3MM22_ORYBR | J3MLA9 | J3MM22 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.650 |
J3MLA9_ORYBR | J3MSK4_ORYBR | J3MLA9 | J3MSK4 | Uncharacterized protein. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.592 |
J3MLA9_ORYBR | J3MU34_ORYBR | J3MLA9 | J3MU34 | Uncharacterized protein. | Uncharacterized protein. | 0.642 |
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