STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MLS2_ORYBRBeta-amylase. (488 aa)    
Predicted Functional Partners:
J3MNT6_ORYBR
Uncharacterized protein.
     
 0.922
J3MGT3_ORYBR
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
  0.900
J3MYC2_ORYBR
Aamy domain-containing protein.
     
 0.762
J3L3G8_ORYBR
Uncharacterized protein.
     
 0.738
J3LHE6_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
J3MHL3_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
J3MTR9_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
J3MTS1_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
J3MY44_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
J3MY45_ORYBR
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.689
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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