STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MNA1_ORYBRUncharacterized protein. (752 aa)    
Predicted Functional Partners:
J3MX09_ORYBR
RING-type domain-containing protein.
   
 0.565
J3LRT9_ORYBR
Chloride channel protein.
      
 0.465
J3M314_ORYBR
Prenylcys_lyase domain-containing protein.
      
 0.457
J3NEV1_ORYBR
Uncharacterized protein.
      
 0.439
J3N0Z3_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
     0.436
J3KUM8_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
     0.431
J3N118_ORYBR
Protein kinase domain-containing protein.
  
     0.409
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.