STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MSE2_ORYBRUncharacterized protein. (106 aa)    
Predicted Functional Partners:
J3LUX9_ORYBR
SANT domain-containing protein.
  
 
  0.585
J3LPN2_ORYBR
Uncharacterized protein.
  
 
  0.562
J3MYJ5_ORYBR
AAA domain-containing protein.
  
 
  0.559
J3MU56_ORYBR
AAA domain-containing protein.
  
 
  0.556
J3LK81_ORYBR
Uncharacterized protein.
  
 
   0.544
J3MDZ9_ORYBR
Uncharacterized protein.
  
 
  0.542
J3N8I6_ORYBR
Uncharacterized protein.
  
     0.541
J3N4S1_ORYBR
Uncharacterized protein.
  
     0.540
J3L787_ORYBR
Uncharacterized protein.
  
     0.539
J3M354_ORYBR
Uncharacterized protein.
  
     0.539
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.