STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MVW1_ORYBRGlyco_hydro_32N domain-containing protein. (484 aa)    
Predicted Functional Partners:
J3KVN0_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3L2N0_ORYBR
Uncharacterized protein.
  
 
 0.424
J3L2N1_ORYBR
PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.424
J3L5W1_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3L6N5_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3LEY6_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3LKA9_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3LQN6_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3LSM6_ORYBR
PfkB domain-containing protein.
  
 
 0.424
J3LZL7_ORYBR
PfkB domain-containing protein.
  
 
 0.424
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.