STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MX47_ORYBRCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (333 aa)    
Predicted Functional Partners:
J3MSF8_ORYBR
RB_A domain-containing protein.
    
 0.612
J3MUU6_ORYBR
Uncharacterized protein.
    
 0.612
J3N8T3_ORYBR
Uncharacterized protein.
    
 0.612
J3LJZ4_ORYBR
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.533
J3N4T6_ORYBR
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.533
J3L6Q1_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.522
J3L949_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.490
J3L951_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.490
J3LDK4_ORYBR
E2F_TDP domain-containing protein.
    
 0.473
NP72
E2F_TDP domain-containing protein.
    
 0.473
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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