STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MXR1_ORYBRUncharacterized protein. (125 aa)    
Predicted Functional Partners:
J3LDX1_ORYBR
Uncharacterized protein.
    
 0.745
J3L687_ORYBR
RECA_2 domain-containing protein.
   
 0.730
J3L1A9_ORYBR
RECA_2 domain-containing protein.
   
 0.722
J3N5Z4_ORYBR
Uncharacterized protein; Belongs to the RecA family.
   
 0.722
J3KWM9_ORYBR
Uncharacterized protein.
   
 0.721
J3KWN6_ORYBR
Uncharacterized protein.
   
 0.721
J3L4M6_ORYBR
Uncharacterized protein.
  
 0.715
J3LI45_ORYBR
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.687
J3L7T2_ORYBR
ERCC4 domain-containing protein.
   
 0.686
J3LD12_ORYBR
Zinc-hook domain-containing protein.
  
 0.621
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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