STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3MXV8_ORYBRHD domain-containing protein. (719 aa)    
Predicted Functional Partners:
J3ML05_ORYBR
Nucleoside diphosphate kinase.
    
 0.940
J3NE09_ORYBR
Nucleoside diphosphate kinase.
    
 0.940
J3N358_ORYBR
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
  0.907
J3KXB0_ORYBR
Uncharacterized protein.
     
  0.900
J3LE21_ORYBR
GTP_cyclohydro2 domain-containing protein.
  
 
  0.816
J3M7W1_ORYBR
GTP_cyclohydro2 domain-containing protein.
  
 
  0.816
J3MTW7_ORYBR
GTP_cyclohydro2 domain-containing protein.
  
 
  0.816
J3NDN0_ORYBR
Elp3 domain-containing protein.
    
 0.809
J3M2C1_ORYBR
GTP_cyclohydroI domain-containing protein.
     
 0.804
J3L256_ORYBR
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.698
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
Server load: low (18%) [HD]