STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3N2Q4_ORYBR1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene); Belongs to the acireductone dioxygenase (ARD) family. (526 aa)    
Predicted Functional Partners:
J3N8E1_ORYBR
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
  
  0.928
J3N2Q5_ORYBR
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
  
  
 
0.902
J3KVK2_ORYBR
Uncharacterized protein.
     
  0.900
J3KWY1_ORYBR
Aminotran_1_2 domain-containing protein.
     
  0.900
J3MDW9_ORYBR
Aminotran_1_2 domain-containing protein.
     
  0.900
J3MY19_ORYBR
Aminotran_1_2 domain-containing protein.
     
  0.900
J3N904_ORYBR
Aminotran_1_2 domain-containing protein.
     
  0.900
J3MD74_ORYBR
Uncharacterized protein.
    
 0.494
J3KUM0_ORYBR
HATPase_c domain-containing protein.
    
 0.459
J3LY82_ORYBR
RING-type domain-containing protein.
      
 0.438
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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