Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3KVN8_ORYBR | J3KZX9_ORYBR | J3KVN8 | J3KZX9 | RING-type domain-containing protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.842 |
J3KVN8_ORYBR | J3KZY0_ORYBR | J3KVN8 | J3KZY0 | RING-type domain-containing protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.842 |
J3KVN8_ORYBR | J3L214_ORYBR | J3KVN8 | J3L214 | RING-type domain-containing protein. | TPR_REGION domain-containing protein. | 0.601 |
J3KVN8_ORYBR | J3LGB9_ORYBR | J3KVN8 | J3LGB9 | RING-type domain-containing protein. | RING-type domain-containing protein. | 0.901 |
J3KVN8_ORYBR | J3LXZ2_ORYBR | J3KVN8 | J3LXZ2 | RING-type domain-containing protein. | F-box domain-containing protein. | 0.605 |
J3KVN8_ORYBR | J3M262_ORYBR | J3KVN8 | J3M262 | RING-type domain-containing protein. | MPN domain-containing protein. | 0.933 |
J3KVN8_ORYBR | J3N2V7_ORYBR | J3KVN8 | J3N2V7 | RING-type domain-containing protein. | Uncharacterized protein; Belongs to the SKP1 family. | 0.703 |
J3KVN8_ORYBR | Rpl2 | J3KVN8 | J3N262 | RING-type domain-containing protein. | Ribosomal_L2_C domain-containing protein. | 0.953 |
J3KZX9_ORYBR | J3KVN8_ORYBR | J3KZX9 | J3KVN8 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | RING-type domain-containing protein. | 0.842 |
J3KZX9_ORYBR | J3LGB9_ORYBR | J3KZX9 | J3LGB9 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | RING-type domain-containing protein. | 0.842 |
J3KZX9_ORYBR | J3LJZ4_ORYBR | J3KZX9 | J3LJZ4 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. | 0.580 |
J3KZX9_ORYBR | J3LXZ2_ORYBR | J3KZX9 | J3LXZ2 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | F-box domain-containing protein. | 0.807 |
J3KZX9_ORYBR | J3M262_ORYBR | J3KZX9 | J3M262 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | MPN domain-containing protein. | 0.880 |
J3KZX9_ORYBR | J3N2V7_ORYBR | J3KZX9 | J3N2V7 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Uncharacterized protein; Belongs to the SKP1 family. | 0.517 |
J3KZX9_ORYBR | J3N4T6_ORYBR | J3KZX9 | J3N4T6 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. | 0.580 |
J3KZY0_ORYBR | J3KVN8_ORYBR | J3KZY0 | J3KVN8 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | RING-type domain-containing protein. | 0.842 |
J3KZY0_ORYBR | J3LGB9_ORYBR | J3KZY0 | J3LGB9 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | RING-type domain-containing protein. | 0.842 |
J3KZY0_ORYBR | J3LJZ4_ORYBR | J3KZY0 | J3LJZ4 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. | 0.580 |
J3KZY0_ORYBR | J3LXZ2_ORYBR | J3KZY0 | J3LXZ2 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | F-box domain-containing protein. | 0.807 |
J3KZY0_ORYBR | J3M262_ORYBR | J3KZY0 | J3M262 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | MPN domain-containing protein. | 0.848 |
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