STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3N392_ORYBRUncharacterized protein. (544 aa)    
Predicted Functional Partners:
J3MTE7_ORYBR
GTD-binding domain-containing protein.
  
     0.443
J3LJ18_ORYBR
DUF4378 domain-containing protein.
  
     0.427
J3M3E4_ORYBR
Uncharacterized protein.
  
     0.424
J3LTC2_ORYBR
Uncharacterized protein.
  
     0.417
J3M0C2_ORYBR
Uncharacterized protein.
  
     0.414
J3M7P1_ORYBR
Uncharacterized protein.
  
     0.414
J3LYM0_ORYBR
GTD-binding domain-containing protein.
  
     0.406
J3MGG6_ORYBR
SBP-type domain-containing protein.
  
     0.402
J3N2M7_ORYBR
GTD-binding domain-containing protein.
  
     0.402
J3MPI2_ORYBR
TF-B3 domain-containing protein.
  
     0.401
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.