STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3N7Q3_ORYBRPPM-type phosphatase domain-containing protein. (432 aa)    
Predicted Functional Partners:
J3MI16_ORYBR
Uncharacterized protein.
    
 0.486
J3MKP3_ORYBR
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.459
J3MMK5_ORYBR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.432
J3L307_ORYBR
Uncharacterized protein.
  
   0.406
J3MLE0_ORYBR
Uncharacterized protein.
      
 0.400
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.