STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3NDG6_ORYBRUncharacterized protein. (441 aa)    
Predicted Functional Partners:
J3M350_ORYBR
BHLH domain-containing protein.
  
     0.502
J3MXB6_ORYBR
BAH domain-containing protein.
  
     0.496
J3L653_ORYBR
BHLH domain-containing protein.
  
     0.495
J3LTR9_ORYBR
GTD-binding domain-containing protein.
  
     0.485
J3MMF3_ORYBR
Uncharacterized protein.
  
     0.480
J3N4H0_ORYBR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.478
J3MFN0_ORYBR
HTH myb-type domain-containing protein.
  
     0.476
J3N7W9_ORYBR
Phytocyanin domain-containing protein.
  
     0.474
J3LZ42_ORYBR
BHLH domain-containing protein.
  
     0.471
J3MBD9_ORYBR
Uncharacterized protein.
  
     0.451
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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