STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3NEL9_ORYBRUncharacterized protein. (336 aa)    
Predicted Functional Partners:
J3LTR6_ORYBR
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.863
J3L5C2_ORYBR
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.817
J3M851_ORYBR
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.817
J3LPX5_ORYBR
Uncharacterized protein.
   
 0.815
J3MVY0_ORYBR
Uncharacterized protein.
   
 0.815
J3LKC7_ORYBR
Uncharacterized protein.
   
 0.814
J3N2K8_ORYBR
Uncharacterized protein.
   
 0.814
J3L5K0_ORYBR
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.812
J3M7Y5_ORYBR
Uncharacterized protein.
   
 0.812
J3ME52_ORYBR
Uncharacterized protein.
   
 0.810
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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