STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANJ27171.1Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)    
Predicted Functional Partners:
ANJ28863.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
ANJ28862.1
Cobalamin biosynthesis protein CbiM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ANJ27172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.993
ANJ26774.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.786
ATC03_01730
Tellurium resistance protein TerC; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.761
ANJ29034.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.740
ANJ26660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.706
ANJ28806.1
BioY protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.663
ANJ27173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Fur family.
     
 0.549
truA
Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.475
Your Current Organism:
Agromyces aureus
NCBI taxonomy Id: 453304
Other names: A. aureus, Agromyces aureus Corretto et al. 2016, Agromyces sp. AR33, DSM 101731, LMG 29235, LMG:29235, strain AR33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.