STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g82411Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (272 aa)    
Predicted Functional Partners:
v1g221743
Predicted protein.
  
0.613
v1g205764
Predicted protein.
  
    0.516
v1g149547
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.512
v1g52909
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.507
v1g128668
Predicted protein.
  
    0.507
v1g87545
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.502
v1g124362
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.501
v1g66300
Predicted protein.
  
     0.494
v1g152171
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.494
v1g91941
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.492
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.