STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g31543Predicted protein. (539 aa)    
Predicted Functional Partners:
v1g205233
Predicted protein.
   
 
 0.548
v1g40956
Predicted protein.
    
   0.499
v1g118527
Predicted protein.
    
   0.499
v1g166693
Predicted protein.
   
 
 0.494
v1g60296
Predicted protein.
   
 
 0.481
v1g208481
Predicted protein.
   
 
 0.466
v1g235777
Predicted protein.
   
 
 0.466
v1g234328
Predicted protein.
   
 
 0.460
v1g116976
Predicted protein.
   
 
 0.423
v1g99563
Predicted protein.
    
 
 0.414
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.