STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g84090Predicted protein. (336 aa)    
Predicted Functional Partners:
v1g80846
Predicted protein.
   
 
 0.962
v1g99611
Predicted protein.
 
    
 0.823
v1g163128
Predicted protein.
  
 
 0.808
v1g100718
Predicted protein.
   
  
 0.750
v1g204295
Predicted protein.
 
 
 0.744
v1g100326
Predicted protein.
   
  
 0.696
v1g118817
Predicted protein.
      
0.693
v1g204294
Predicted protein.
  
 
 0.685
v1g115367
Predicted protein.
   
  
 0.678
v1g199029
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.677
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.