STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g198581Predicted protein. (123 aa)    
Predicted Functional Partners:
v1g118883
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.995
v1g240928
Predicted protein.
    
 0.993
v1g243573
Predicted protein.
    
 0.992
v1g195753
Predicted protein.
    
  0.991
v1g205577
Predicted protein.
    
 0.967
v1g222887
Predicted protein.
    
 0.960
v1g209074
Predicted protein.
    
 0.909
v1g168328
Predicted protein.
    
 0.909
v1g200333
Predicted protein.
    
  0.904
v1g241912
Predicted protein.
    
 0.903
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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