STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g85927Predicted protein. (418 aa)    
Predicted Functional Partners:
v1g229200
Predicted protein.
   
 
 0.951
v1g182326
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.719
v1g134716
Predicted protein.
    
 
 0.719
v1g161158
Sorting nexin; Involved in several stages of intracellular trafficking.
    
 
 0.717
v1g244464
Predicted protein.
    
 
 0.717
v1g161846
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.677
v1g146526
Predicted protein.
    
 
 0.677
v1g165490
Predicted protein.
    
 
 0.663
v1g167750
Predicted protein.
   
  
 0.637
v1g10501
Predicted protein.
   
  
 0.575
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.