STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g199864alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (494 aa)    
Predicted Functional Partners:
v1g80092
Predicted protein.
   
 
 0.824
v1g163820
Predicted protein.
    
 
 0.771
v1g211292
Predicted protein.
     
 0.753
v1g108031
Predicted protein.
   
 
 0.721
v1g167428
Predicted protein.
   
 
 0.721
v1g179634
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.689
v1g173865
Predicted protein.
      
 0.685
v1g185483
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.677
v1g216823
Predicted protein; Belongs to the heat shock protein 70 family.
   
 
 0.674
v1g61368
Predicted protein.
    
 
 0.643
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.