STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g239975Predicted protein. (681 aa)    
Predicted Functional Partners:
v1g179675
Predicted protein.
  
 0.953
v1g107098
Predicted protein.
  
 0.953
v1g157664
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.839
v1g82156
Citrate synthase; Belongs to the citrate synthase family.
  
 0.817
v1g157608
Citrate synthase; Belongs to the citrate synthase family.
  
 0.817
v1g223532
Predicted protein.
  
  
 0.744
v1g112267
Predicted protein.
     
 0.743
v1g246109
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.
  
 0.722
v1g156386
Predicted protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.722
v1g86861
Aspartate aminotransferase.
   
 0.701
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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