STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g94111Predicted protein. (202 aa)    
Predicted Functional Partners:
v1g94026
Predicted protein.
 
      0.900
v1g226879
Predicted protein.
    
 0.842
v1g170236
Predicted protein.
    
 
 0.607
v1g161221
Predicted protein.
    
 0.588
v1g135257
Predicted protein.
    
 0.588
v1g223552
Predicted protein.
    
 0.588
v1g188209
DNA ligase.
      
 0.560
v1g189188
Predicted protein.
 
    
 0.511
v1g48067
Predicted protein.
    
 0.441
v1g241911
Predicted protein.
   
 0.428
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.