STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g182498Predicted protein. (189 aa)    
Predicted Functional Partners:
v1g180167
Coiled-coil domain-containing protein 22 homolog; Belongs to the CCDC22 family.
    
 0.821
v1g235966
Predicted protein.
   
 0.792
v1g226878
Predicted protein.
   
 0.783
v1g158694
Predicted protein.
    
 0.777
v1g222319
Predicted protein.
  
 
 0.772
v1g116741
Predicted protein.
    
 0.745
v1g121194
Predicted protein.
    
 0.745
v1g243323
Predicted protein.
    
 0.728
v1g90329
Predicted protein.
    
 
 0.621
v1g133840
Predicted protein.
    
 0.574
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.