STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g96060Predicted protein. (173 aa)    
Predicted Functional Partners:
v1g190378
Predicted protein.
    
 
 0.637
v1g29235
Predicted protein.
    
 0.636
v1g46382
Predicted protein; Belongs to the glutamine synthetase family.
      
 0.545
v1g170326
Predicted protein.
   
 
 0.529
v1g9975
Predicted protein.
   
 
 0.529
v1g137471
Predicted protein.
    
 
 0.510
v1g229989
Predicted protein.
    
 
 0.494
v1g195585
Predicted protein.
    
 
 0.494
v1g228171
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.474
v1g240700
Predicted protein.
   
 
 0.447
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.