STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g203298Myophilin-like protein. (196 aa)    
Predicted Functional Partners:
v1g40956
Predicted protein.
    
 
 0.755
v1g118527
Predicted protein.
    
 
 0.755
v1g159935
Predicted protein.
     
 0.562
v1g245872
Predicted protein.
   
 
 0.463
v1g164783
Predicted protein.
   
 
 0.458
v1g164461
Predicted protein.
   
 
 0.434
v1g120663
Predicted protein.
  
   
 0.412
v1g239614
Predicted protein.
   
 
 0.410
v1g240553
Predicted protein.
   
 
 0.410
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.