STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g164601Predicted protein. (348 aa)    
Predicted Functional Partners:
v1g157887
Predicted protein.
    
   0.867
v1g95207
Predicted protein.
      
 0.724
v1g118838
Predicted protein.
      
 0.724
v1g160815
Predicted protein.
      
 0.639
v1g204297
Predicted protein.
  
  
 0.607
v1g247134
Predicted protein.
 
    
 0.590
v1g183374
Predicted protein.
      
 0.553
v1g183467
Predicted protein.
      
 0.553
v1g61368
Predicted protein.
      
 0.534
v1g173646
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
      
 0.444
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.