STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g236828Predicted protein. (338 aa)    
Predicted Functional Partners:
v1g185061
Predicted protein.
   
   0.859
v1g94276
Predicted protein.
   
 0.756
v1g197434
Predicted protein.
    
   0.752
v1g167764
Nuclear cap-binding protein subunit 2.
    
 0.736
v1g193215
Predicted protein.
   
 0.735
v1g202761
Predicted protein.
   
 0.705
v1g96464
Predicted protein.
   
 0.693
v1g170326
Predicted protein.
   
0.691
v1g9975
Predicted protein.
   
 0.691
v1g167719
Predicted protein; Belongs to the DEAD box helicase family.
   
 0.688
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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