STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g185856Predicted protein. (483 aa)    
Predicted Functional Partners:
v1g118404
Predicted protein.
  
  
 0.912
v1g118379
Predicted protein.
  
  
 0.912
v1g245260
Predicted protein.
     
 0.887
v1g243817
Predicted protein.
     
 0.840
v1g95178
Predicted protein.
    
 0.800
v1g95059
Predicted protein.
    
 0.800
v1g112267
Predicted protein.
     
 0.778
v1g184971
Predicted protein.
  
  
 0.774
v1g187976
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.774
v1g103700
Predicted protein.
  
  
 0.724
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.