STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g169537Golgi apparatus membrane protein TVP23 homolog. (198 aa)    
Predicted Functional Partners:
v1g182503
Protein YIPF.
   
 
 0.893
v1g211193
Predicted protein.
    
   0.869
v1g115643
Predicted protein; Belongs to the protein kinase superfamily.
    
   0.869
v1g246530
Predicted protein.
   
 
 0.842
v1g104383
Predicted protein; Belongs to the protein kinase superfamily.
    
   0.837
v1g85495
Predicted protein.
   
 
 0.708
v1g234429
Predicted protein.
      
 0.638
v1g165271
Predicted protein.
      
 0.620
v1g238327
Predicted protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
  
 0.542
v1g86602
Predicted protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
  
 0.542
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.