STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g244938Predicted protein. (284 aa)    
Predicted Functional Partners:
v1g89765
Predicted protein.
   
   0.690
v1g193152
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  
 0.636
v1g239885
Predicted protein.
   
  
 0.609
v1g175233
Predicted protein.
      
 0.607
v1g169376
Predicted protein.
   
 
  0.594
v1g114579
Predicted protein.
   
 
  0.594
v1g182323
Predicted protein.
   
 
 0.535
v1g217113
Predicted protein.
      
 0.515
v1g120019
Predicted protein.
   
  
 0.506
v1g226633
Predicted protein.
   
 
  0.434
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.