STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g245247Predicted protein. (144 aa)    
Predicted Functional Partners:
v1g162041
Predicted protein.
    
 0.998
v1g162359
Predicted protein.
   
 0.998
v1g243279
Predicted protein.
    
 0.998
v1g245560
Predicted protein.
   
 
 0.996
v1g237797
Predicted protein.
    
 
 0.995
v1g185061
Predicted protein.
    
 
 0.995
v1g169197
Predicted protein.
   
 
 0.995
cdc5l
Cell division cycle 5-related protein; DNA-binding protein involved in cell cycle control. May act as a transcription activator. Plays role in pre-mRNA splicing as core component of precatalytic, catalytic and postcatalytic spliceosomal complexes. May also play a role in the response to DNA damage (DDR).
    
 
 0.995
v1g189775
Predicted protein.
   
 
 0.995
v1g247133
Predicted protein.
   
 
 0.995
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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