STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g12734Predicted protein; Belongs to the potassium channel family. (361 aa)    
Predicted Functional Partners:
v1g193152
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.871
v1g160310
Predicted protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.648
v1g235042
Predicted protein.
   
 0.648
v1g160446
Predicted protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.646
v1g240524
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.642
v1g180772
Predicted protein.
   
 0.641
v1g246818
Predicted protein.
   
 0.641
v1g240738
Predicted protein.
   
 0.632
v1g248539
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.610
v1g237122
Predicted protein.
  
 0.598
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.