Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
v1g129189 | v1g171779 | A7SRX1 | A7SL39 | Predicted protein. | Transcriptional adapter. | 0.887 |
v1g129189 | v1g185504 | A7SRX1 | A7S4C1 | Predicted protein. | Predicted protein. | 0.996 |
v1g129189 | v1g199061 | A7SRX1 | A7RLY8 | Predicted protein. | Predicted protein. | 0.996 |
v1g129189 | v1g236583 | A7SRX1 | A7RRY5 | Predicted protein. | SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. | 0.958 |
v1g129189 | v1g238849 | A7SRX1 | A7RK03 | Predicted protein. | Predicted protein. | 0.994 |
v1g129189 | v1g242695 | A7SRX1 | A7S403 | Predicted protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.965 |
v1g129189 | v1g90512 | A7SRX1 | A7RR68 | Predicted protein. | Predicted protein. | 0.996 |
v1g129189 | v1g93714 | A7SRX1 | A7RU94 | Predicted protein. | Predicted protein. | 0.996 |
v1g129189 | v1g95047 | A7SRX1 | A7RVR1 | Predicted protein. | Predicted protein. | 0.992 |
v1g129189 | v1g96946 | A7SRX1 | A7RXH0 | Predicted protein. | Predicted protein. | 0.984 |
v1g171779 | v1g129189 | A7SL39 | A7SRX1 | Transcriptional adapter. | Predicted protein. | 0.887 |
v1g171779 | v1g185504 | A7SL39 | A7S4C1 | Transcriptional adapter. | Predicted protein. | 0.978 |
v1g171779 | v1g199061 | A7SL39 | A7RLY8 | Transcriptional adapter. | Predicted protein. | 0.926 |
v1g171779 | v1g236583 | A7SL39 | A7RRY5 | Transcriptional adapter. | SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. | 0.866 |
v1g171779 | v1g238849 | A7SL39 | A7RK03 | Transcriptional adapter. | Predicted protein. | 0.852 |
v1g171779 | v1g242695 | A7SL39 | A7S403 | Transcriptional adapter. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.939 |
v1g171779 | v1g90512 | A7SL39 | A7RR68 | Transcriptional adapter. | Predicted protein. | 0.966 |
v1g171779 | v1g93714 | A7SL39 | A7RU94 | Transcriptional adapter. | Predicted protein. | 0.961 |
v1g171779 | v1g95047 | A7SL39 | A7RVR1 | Transcriptional adapter. | Predicted protein. | 0.885 |
v1g171779 | v1g96946 | A7SL39 | A7RXH0 | Transcriptional adapter. | Predicted protein. | 0.925 |
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