STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g171979Predicted protein. (127 aa)    
Predicted Functional Partners:
v1g184753
Predicted protein.
   
 
 0.851
v1g159935
Predicted protein.
    
 0.644
v1g93313
Predicted protein.
  
   
 0.538
v1g93153
Predicted protein.
  
   
 0.538
v1g145796
Predicted protein.
  
   
 0.537
v1g234654
Predicted protein.
  
   
 0.529
v1g236931
Predicted protein.
  
   
 0.528
v1g181408
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
  
    0.507
v1g240738
Predicted protein.
  
    0.507
v1g94285
Predicted protein; Belongs to the universal ribosomal protein uL14 family.
  
  
 0.486
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.