STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g246414Predicted protein; Belongs to the acid ceramidase family. (405 aa)    
Predicted Functional Partners:
v1g234171
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.957
v1g40552
Predicted protein.
   
 0.935
v1g239044
Predicted protein.
     
 0.930
v1g105071
Predicted protein.
     
 0.930
v1g128774
Predicted protein.
     
 0.929
v1g168783
Glucosylceramidase.
   
 
 0.923
v1g79235
Predicted protein.
    
 0.920
v1g243542
Predicted protein.
    
 0.920
v1g174147
Predicted protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
     
 0.919
v1g193358
Predicted protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
     
 0.919
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.