STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g246784Predicted protein. (422 aa)    
Predicted Functional Partners:
v1g232160
Protein AKTIP homolog; Belongs to the ubiquitin-conjugating enzyme family. FTS subfamily.
    
 
 0.933
v1g40628
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.921
v1g5909
Predicted protein.
   
 
 0.690
v1g161593
Predicted protein.
    
 0.663
v1g92366
Predicted protein.
      
 0.639
v1g215046
Predicted protein.
      
 0.628
v1g243165
UPF0518 protein v1g243165; Belongs to the UPF0518 family.
    
 0.626
v1g152614
Predicted protein.
    
 0.626
v1g197530
Predicted protein.
    
 
 0.609
v1g222366
Predicted protein.
    
 
 0.609
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.