STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g128552Predicted protein. (924 aa)    
Predicted Functional Partners:
v1g189228
Predicted protein; Belongs to the cullin family.
   
 0.976
v1g178205
Predicted protein; Belongs to the cullin family.
    
 0.906
v1g244232
Predicted protein; Belongs to the cullin family.
    
 0.849
v1g90580
Predicted protein; Belongs to the cullin family.
   
 0.845
v1g171734
Predicted protein; Belongs to the cullin family.
   
 0.845
v1g169697
Predicted protein.
    
 0.840
v1g144687
Predicted protein.
    
 0.840
v1g181003
Predicted protein.
    
 0.838
v1g164893
Predicted protein; Belongs to the SKP1 family.
    
 0.821
v1g116912
Predicted protein.
     
 0.780
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.