STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g247042Predicted protein. (426 aa)    
Predicted Functional Partners:
v1g161158
Sorting nexin; Involved in several stages of intracellular trafficking.
     
 
0.900
v1g237996
Predicted protein.
   
 0.661
v1g87802
Predicted protein.
   
 0.661
v1g246794
Predicted protein.
   
 0.661
v1g134716
Predicted protein.
   
0.661
v1g248001
Predicted protein.
   
 0.661
v1g200061
Predicted protein.
     
 0.617
v1g215046
Predicted protein.
   
 
 0.563
v1g190491
AP complex subunit beta.
     
 0.548
v1g175828
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 
  0.546
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.