STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g129806Predicted protein. (106 aa)    
Predicted Functional Partners:
v1g239961
Predicted protein.
   
 
 0.792
v1g182399
Predicted protein.
   
 
 0.633
v1g157449
Predicted protein.
  
 
 0.570
v1g79012
Predicted protein.
  
 
 0.560
v1g163153
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
  0.518
v1g79078
Predicted protein.
   
 
 0.502
v1g236734
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
    0.468
v1g215693
Predicted protein; Belongs to the AAA ATPase family.
   
   0.462
v1g236108
Predicted protein.
   
 
 0.459
v1g208976
Predicted protein.
  
 
 0.454
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.