STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g217783Predicted protein. (226 aa)    
Predicted Functional Partners:
v1g193152
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.992
v1g181408
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.911
v1g242621
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.911
v1g158071
Predicted protein.
   
 0.909
v1g159984
Predicted protein.
     
  0.909
v1g190935
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.908
v1g220734
Predicted protein.
  
 
 0.908
v1g239074
Predicted protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.907
v1g239161
Predicted protein.
   
 0.906
v1g241359
Predicted protein.
    
 0.904
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.