STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g40919Predicted protein. (324 aa)    
Predicted Functional Partners:
v1g57443
Predicted protein.
  
    0.526
v1g156191
Predicted protein.
  
    0.526
v1g11965
Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.522
v1g99026
Predicted protein.
  
    0.520
v1g127924
Predicted protein.
  
     0.508
v1g113370
Predicted protein.
  
     0.503
v1g45071
Predicted protein.
  
     0.497
v1g9657
Predicted protein.
  
     0.488
v1g145792
Predicted protein.
  
     0.483
v1g147460
Predicted protein.
  
     0.466
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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