STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g137725Predicted protein. (753 aa)    
Predicted Functional Partners:
v1g199476
Predicted protein.
   
 0.999
v1g247781
Predicted protein.
    
 0.984
v1g114480
Predicted protein.
    
 0.980
v1g147404
Predicted protein.
    
 0.980
v1g169387
Predicted protein.
    
 0.973
v1g89357
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.968
v1g244321
Predicted protein.
   
 0.964
v1g243839
Predicted protein.
    
 0.953
v1g248447
Predicted protein.
    
 0.953
v1g236308
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 
 0.935
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.