STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g220742Predicted protein. (338 aa)    
Predicted Functional Partners:
v1g160160
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.864
v1g243846
Predicted protein; Belongs to the WD repeat SEC13 family.
    
 0.857
v1g30774
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.767
v1g135849
Predicted protein; Belongs to the WD repeat SEC13 family.
    
 0.767
v1g242878
Predicted protein.
   
 0.716
v1g222898
Predicted protein.
   
 0.716
v1g118813
Predicted protein.
    
 0.711
v1g145157
Predicted protein.
  
  
 0.671
v1g200773
Predicted protein.
    
 0.633
v1g97190
Predicted protein.
    
 0.633
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.