STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g56293RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (88 aa)    
Predicted Functional Partners:
v1g200013
Predicted protein.
   
 0.987
v1g205670
Predicted protein.
   
 0.974
v1g136497
Predicted protein.
    
 0.959
v1g93902
Predicted protein.
  
0.952
v1g167764
Nuclear cap-binding protein subunit 2.
   
 0.939
v1g88040
Predicted protein.
    
 0.923
v1g5094
Predicted protein.
    
 0.923
v1g200773
Predicted protein.
   
 
  0.920
v1g202761
Predicted protein.
   
 0.920
v1g97190
Predicted protein.
   
 
  0.920
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.