STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g143133Predicted protein. (141 aa)    
Predicted Functional Partners:
v1g3250
Predicted protein.
  
 
  0.516
v1g224641
Predicted protein.
  
 
  0.516
v1g84687
Predicted protein.
  
     0.515
v1g19118
Predicted protein.
  
 
  0.500
v1g143289
Predicted protein.
  
 
  0.491
v1g87090
Predicted protein.
  
     0.489
v1g87375
Predicted protein.
  
     0.488
v1g208146
Predicted protein.
  
     0.483
v1g55132
Predicted protein.
  
 
  0.480
v1g49172
Predicted protein.
  
 
  0.475
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.